Analysis
By Aubray1 author17 articles
- OncoFOLLOW - list of targeted genes
- OncoSELECT - list of targeted genesAccording to the cancer type, the targeted genes may vary
- Which panels can you analyze?
- What kind of mutation can you detect?
- Which algorithm do you use to detect variants?
- How long does it take to analyze to analyze my data? What is your Turn Around Time?
- How do you perform your QC analysis?
- CNV analysisQuestions about our CNV analysis
- Can you calculate TMB (Tumor Mutation Burden)?
- What is an 'Alpha List'?
- How do you analyze a sample sequenced with 2 different sequencers (e.g. illumina and Ion Torrent) for the same sample?
- How to encode multiple samples with one file?You can create up to 10 samples at once by uploading a file that you would have encoded. Here is how to proceed:
- Do you confirm the variants found through any method (Sanger, MLPA, qPCR)?
- Do you perform any orthogonal validation to determine if a variant is true?
- Which version of the human genome reference do you use?
- Will there be a version of OncoKDM based on hg38 or GRch38?
- What is gene "uniformity"